Transcript: lnc-ZNF419-3:5

Basic information

LNCipedia transcript ID: lnc-ZNF419-3:5 
LNCipedia gene ID: lnc-ZNF419-3
Ensembl Gene ID: ENSG00000268266
Ensembl Transcript ID: ENST00000594562
Location (hg38): chr19:57477699-57482005
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 513 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068239; ENST00000594562.1
Alternative gene names: ENSG00000268266.1; AC003005.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.9404 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF419-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF773-3:2
4.0 lnc-ZNF773-3:2
4.1 lnc-ZNF773-3:2
5.0 lnc-ZNF773-3:2
5.1 lnc-ZNF587B-25:5
5.2 lnc-ZNF419-3:5