Transcript: lnc-ZNF704-1:1

Basic information

LNCipedia transcript ID: lnc-ZNF704-1:1 
LNCipedia gene ID: lnc-ZNF704-1
Ensembl Gene ID: ENSG00000254162
Ensembl Transcript ID: ENST00000523871
Location (hg38): chr8:80535006-80539135
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3766 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523871; ENST00000523871.1; RP11-48B3.3-001; OTTHUMT00000379297.1; NONHSAT127416
Alternative gene names: ENSG00000254162; RP11-48B3.3; ENSG00000254162.1; OTTHUMG00000164576.1; AC009812.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.3891 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF704-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF704-1:1
3.1 lnc-ZNF704-1:1
4.0 lnc-ZNF704-1:1
4.1 lnc-ZNF704-1:1
5.0 lnc-ZNF704-1:1
5.1 lnc-CPA6-139:1
5.2 lnc-ZNF704-1:1