Transcript: lnc-ZNF23-2:1

Basic information

LNCipedia transcript ID: lnc-ZNF23-2:1 
LNCipedia gene ID: lnc-ZNF23-2
Location (hg38): chr16:71432867-71433376
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 389 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024718; NONHSAT143475
Alternative gene names: XLOC_011999; linc-FTSJD1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1032.7938 non-coding 
CPAT coding probability 70.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF23-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF23-1:1
3.1 lnc-ZNF23-2:1
4.0 lnc-ZNF23-2:1
4.1 lnc-ZNF23-2:1
5.0 lnc-ZNF23-2:1
5.1 lnc-ZNF19-4:1
5.2 lnc-ZNF23-2:1