Transcript: lnc-BID-1:2

Basic information

LNCipedia transcript ID: lnc-BID-1:2 
LNCipedia gene ID: lnc-BID-1
Ensembl Gene ID: ENSG00000093100
Ensembl Transcript ID: ENST00000476405
Location (hg38): chr22:17787652-17811497
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4328 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000476405.1; XXbac-B461K10.4-002; OTTHUMT00000316175.1; NONHSAT083231
Alternative gene names: ENSG00000093100.13; XXbac-B461K10.4; OTTHUMG00000150085.1; AC016026.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1461.5791 coding 
CPAT coding probability 99.43% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BID-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XXbac-B461K10.4.1-1:1
4.0 lnc-XXbac-B461K10.4.1-1:1
4.1 lnc-XXbac-B461K10.4.1-1:1
5.0 lnc-XXbac-B461K10.4.1-1:1
5.1 lnc-RTN4R-59:1
5.2 lnc-BID-1:2