Transcript: lnc-USP12-9:15

Basic information

LNCipedia transcript ID: lnc-USP12-9:15 
LNCipedia gene ID: lnc-USP12-9
Location (hg38): chr13:27201206-27202307
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 510 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022236; NONHSAT032637
Alternative gene names: XLOC_010541; linc-USP12-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.3919 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP12-9:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP12-2:1
3.1 lnc-USP12-2:1
4.0 lnc-USP12-2:1
4.1 LINC00412:15
5.0 LINC00412:15
5.1 lnc-SLC7A1-26:15
5.2 lnc-USP12-9:15