Transcript: lnc-UBE3C-10:1

Basic information

LNCipedia transcript ID: lnc-UBE3C-10:1 
LNCipedia gene ID: lnc-UBE3C-10
Ensembl Gene ID: ENSG00000269446
Ensembl Transcript ID: ENST00000594086
Location (hg38): chr7:157109980-157111072
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1093 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000594086.2
Alternative gene names: ENSG00000269446.2; RP4-639J15.3; AC006967.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.7617 non-coding 
CPAT coding probability 6.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBE3C-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-UBE3C-10:1
4.1 lnc-UBE3C-10:1
5.0 lnc-UBE3C-10:1
5.1 lnc-RNF32-21:1
5.2 lnc-UBE3C-10:1