Transcript: lnc-ATP2B3-2:2

Basic information

LNCipedia transcript ID: lnc-ATP2B3-2:2 
LNCipedia gene ID: lnc-ATP2B3-2
Location (hg38): chrX:153494953-153509546
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 396 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT139075
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -436.7272 non-coding 
CPAT coding probability 4.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP2B3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-U82695.9.1-2:1
4.0 lnc-U82695.9.1-2:1
4.1 lnc-U82695.9.1-2:1
5.0 lnc-U82695.9.1-2:1
5.1 lnc-MAGEA11-47:1
5.2 lnc-ATP2B3-2:2