Transcript: lnc-TSPYL5-2:2

Basic information

LNCipedia transcript ID: lnc-TSPYL5-2:2 
LNCipedia gene ID: lnc-TSPYL5-2
Location (hg38): chr8:97617936-97618643
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 305 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT127879; FPKM1_group_31848_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.8705 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPYL5-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSPYL5-2:2
4.0 lnc-TSPYL5-2:2
4.1 lnc-TSPYL5-2:2
5.0 lnc-TSPYL5-2:2
5.1 lnc-ZNF706-109:2
5.2 lnc-TSPYL5-2:2