Transcript: lnc-TNFAIP6-2:4

Basic information

LNCipedia transcript ID: lnc-TNFAIP6-2:4 
LNCipedia gene ID: lnc-TNFAIP6-2
Location (hg38): chr2:150628885-150635665
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 861 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004919; NONHSAT074939
Alternative gene names: XLOC_001707; linc-TNFAIP6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.3936 non-coding 
CPAT coding probability 6.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNFAIP6-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TNFAIP6-2:3
3.1 lnc-TNFAIP6-2:4
4.0 lnc-TNFAIP6-2:4
4.1 lnc-TNFAIP6-2:4
5.0 lnc-TNFAIP6-2:4
5.1 lnc-KCNJ3-31:5
5.2 lnc-TNFAIP6-2:4