Transcript: LINC02060:8

Basic information

LNCipedia transcript ID: LINC02060:8 
HGNC Gene Symbol: LINC02060    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2060
Ensembl Gene ID: ENSG00000250156
Ensembl Transcript ID: ENST00000506041
RefSeq ID: NR_105021
Location (hg38): chr5:88408982-88439090
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1626 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_105021; ENST00000506041.2; NR_105021.1
Alternative gene names: ENSG00000250156.3; CTC-498M16.2; LINC02060; LOC102546226


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.445 non-coding 
CPAT coding probability 3.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02060:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM161B-2:2
4.0 lnc-TMEM161B-2:2
4.1 lnc-TMEM161B-2:2
5.0 lnc-TMEM161B-2:2
5.1 LINC02060:4
5.2 LINC02060:8