Transcript: LINC01819:13

Basic information

LNCipedia transcript ID: LINC01819:13 
HGNC Gene Symbol: LINC01819    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1819
Ensembl Gene ID: ENSG00000231826
Ensembl Transcript ID: ENST00000422351
RefSeq ID: NR_110585
Location (hg38): chr2:43027853-43039543
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2156 bp
Exons: 6
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000422351; ENST00000422351.1; AC016735.2-001; OTTHUMT00000326016.2; NONHSAT070369; NR_110585; ENST00000422351.5; NR_110585.1
Alternative gene names: ENSG00000231826; AC016735.2; ENSG00000231826.1; OTTHUMG00000152373.2; ENSG00000231826.5; LINC01819; LOC102723854


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.5799 non-coding 
CPAT coding probability 12.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01819:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-THADA-3:2
3.1 lnc-THADA-3:2
4.0 lnc-THADA-3:2
4.1 lnc-THADA-3:2
5.0 lnc-THADA-3:2
5.1 LINC01819:6
5.2 LINC01819:13