Transcript: lnc-SYF2-1:4

Basic information

LNCipedia transcript ID: lnc-SYF2-1:4 
LNCipedia gene ID: lnc-SYF2-1
Location (hg38): chr1:25253648-25266803
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 383 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00002308; NONHSAT001698
Alternative gene names: XLOC_000746; linc-C1orf63


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.4889 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SYF2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SYF2-1:4
3.1 lnc-SYF2-1:4
4.0 lnc-SYF2-1:4
4.1 lnc-SYF2-1:4
5.0 lnc-SYF2-1:4
5.1 lnc-CRYBG2-17:6
5.2 lnc-SYF2-1:4