Transcript: lnc-MED22-1:1

Basic information

LNCipedia transcript ID: lnc-MED22-1:1 
LNCipedia gene ID: lnc-MED22-1
Location (hg38): chr9:133330707-133336210
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2273 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT135301; NR_103874
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 1416.2297 coding 
CPAT coding probability 71.44% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MED22-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SURF6-1:1
4.0 lnc-SURF6-1:1
4.1 lnc-SURF6-1:1
5.0 lnc-SURF6-1:1
5.1 lnc-SURF1-4:1
5.2 lnc-MED22-1:1