Transcript: lnc-SUMF2-5:9

Basic information

LNCipedia transcript ID: lnc-SUMF2-5:9 
LNCipedia gene ID: lnc-SUMF2-5
Location (hg38): chr7:56659150-56675080
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1344 bp
Exons: 10
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT120781; FPKM1_group_29780_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.6859 non-coding 
CPAT coding probability 10.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SUMF2-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SUMF2-5:9
4.0 lnc-SUMF2-5:9
4.1 lnc-SUMF2-5:9
5.0 lnc-SUMF2-5:9
5.1 lnc-CCT6A-28:1
5.2 lnc-SUMF2-5:9