Transcript: lnc-SLC30A7-2:8

Basic information

LNCipedia transcript ID: lnc-SLC30A7-2:8 
LNCipedia gene ID: lnc-SLC30A7-2
RefSeq ID: NR_109849
Location (hg38): chr1:101025846-101087379
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1326 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109849; NR_109849.1
Alternative gene names: LOC102606465


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.1957 non-coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC30A7-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC30A7-2:8
4.0 lnc-SLC30A7-2:8
4.1 lnc-SLC30A7-2:8
5.0 lnc-SLC30A7-2:8
5.1 lnc-SLC30A7-2:8
5.2 lnc-SLC30A7-2:8