Transcript: lnc-SIRPG-5:1

Basic information

LNCipedia transcript ID: lnc-SIRPG-5:1 
LNCipedia gene ID: lnc-SIRPG-5
Location (hg38): chr20:1735808-1839165
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1824 bp
Exons: 9
Sources: Nielsen et al.,2014
Alternative transcript names: l_2058_chr20:1716453-1746293_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.6501 non-coding 
CPAT coding probability 16.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIRPG-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIRPG-5:1
4.0 lnc-SIRPG-5:1
4.1 lnc-SIRPG-5:1
5.0 lnc-SIRPG-5:1
5.1 lnc-RNF24-56:1
5.2 lnc-SIRPG-5:1