Transcript: LINC02041:8

Basic information

LNCipedia transcript ID: LINC02041:8 
LNCipedia gene ID: LINC02041
Location (hg38): chr3:187448823-187450192
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1013 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT093888; FPKM1_group_22594_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.4195 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02041:8 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTP4-2:2
4.0 lnc-RTP4-2:2
4.1 lnc-RTP4-2:2
5.0 lnc-RTP4-2:2
5.1 LINC02041:4
5.2 LINC02041:8