Transcript: lnc-KHNYN-1:1

Basic information

LNCipedia transcript ID: lnc-KHNYN-1:1 
LNCipedia gene ID: lnc-KHNYN-1
RefSeq ID: NR_110032
Location (hg38): chr14:24442953-24502197
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2116 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110032; NR_110032.1
Alternative gene names: LOC101927045


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.3736 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHNYN-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-80A15.1.1-1:2
4.0 lnc-RP11-80A15.1.1-1:2
4.1 lnc-RP11-80A15.1.1-1:2
5.0 lnc-RP11-80A15.1.1-1:2
5.1 lnc-PABPN1-41:1
5.2 lnc-KHNYN-1:1