Transcript: lnc-KHNYN-1:2

Basic information

LNCipedia transcript ID: lnc-KHNYN-1:2 
LNCipedia gene ID: lnc-KHNYN-1
Location (hg38): chr14:24442972-24502197
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2097 bp
Exons: 3
Sources: Biogazelle lncRNA chip; NONCODE v4
Alternative transcript names: ENST00000502977; NONHSAT036062
Alternative gene names: ENSG00000251021


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.3736 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHNYN-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-80A15.1.1-1:1
3.1 lnc-RP11-80A15.1.1-1:1
4.0 lnc-RP11-80A15.1.1-1:1
4.1 lnc-RP11-80A15.1.1-1:1
5.0 lnc-RP11-80A15.1.1-1:1
5.1 lnc-PABPN1-41:2
5.2 lnc-KHNYN-1:2