Transcript: lnc-ZHX2-6:4

Basic information

LNCipedia transcript ID: lnc-ZHX2-6:4 
LNCipedia gene ID: lnc-ZHX2-6
Location (hg38): chr8:121697637-121994065
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1015 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014847; NONHSAT128476
Alternative gene names: XLOC_006911; linc-ZHX2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.3626 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZHX2-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-785H20.1.1-1:4
3.1 lnc-RP11-785H20.1.1-1:4
4.0 lnc-RP11-785H20.1.1-1:4
4.1 lnc-RP11-785H20.1.1-1:4
5.0 lnc-RP11-785H20.1.1-1:4
5.1 lnc-NOV-16:4
5.2 lnc-ZHX2-6:4