Transcript: lnc-ASCL1-6:5

Basic information

LNCipedia transcript ID: lnc-ASCL1-6:5 
LNCipedia gene ID: lnc-ASCL1-6
Location (hg38): chr12:103151842-103168308
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 926 bp
Exons: 7
Sources: Refseq - Dec 2014
Alternative transcript names: NR_126333
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.364 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASCL1-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-552I14.1.1-1:15
4.0 lnc-RP11-552I14.1.1-1:15
4.1 lnc-RP11-552I14.1.1-1:15
5.0 lnc-RP11-552I14.1.1-1:15
5.1 lnc-STAB2-6:5
5.2 lnc-ASCL1-6:5