Transcript: lnc-NAGS-1:4

Basic information

LNCipedia transcript ID: lnc-NAGS-1:4 
LNCipedia gene ID: lnc-NAGS-1
Location (hg38): chr17:43934106-43935792
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1499 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT053887
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.7014 non-coding 
CPAT coding probability 15.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAGS-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-527L4.2.1-1:1
4.0 lnc-RP11-527L4.2.1-1:1
4.1 lnc-RP11-527L4.2.1-1:1
5.0 lnc-RP11-527L4.2.1-1:1
5.1 lnc-DHX8-10:1
5.2 lnc-NAGS-1:4