Transcript: lnc-PPP1R12B-6:2

Basic information

LNCipedia transcript ID: lnc-PPP1R12B-6:2 
LNCipedia gene ID: lnc-PPP1R12B-6
Location (hg38): chr1:202796030-202797094
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1065 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT008849
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.5098 non-coding 
CPAT coding probability 34.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP1R12B-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-480I12.4.1-6:1
4.0 lnc-RP11-480I12.4.1-6:1
4.1 lnc-RP11-480I12.4.1-6:1
5.0 lnc-RP11-480I12.4.1-6:1
5.1 lnc-ADORA1-10:1
5.2 lnc-PPP1R12B-6:2