Transcript: LINC02213:6

Basic information

LNCipedia transcript ID: LINC02213:6 
HGNC Gene Symbol: LINC02213    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2213
Ensembl Gene ID: ENSG00000249160
Ensembl Transcript ID: ENST00000504650
Location (hg38): chr5:10505443-10522084
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 518 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT100453; ENST00000504650.2
Alternative gene names: ENSG00000249160.4; RP11-1C1.5; LINC02213


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.6368 non-coding 
CPAT coding probability 3.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02213:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-1C1.5.1-3:1
4.0 lnc-RP11-1C1.5.1-3:1
4.1 lnc-RP11-1C1.5.1-3:1
5.0 lnc-RP11-1C1.5.1-3:1
5.1 LINC02213:2
5.2 LINC02213:6