Transcript: lnc-RIMKLB-2:2

Basic information

LNCipedia transcript ID: lnc-RIMKLB-2:2 
LNCipedia gene ID: lnc-RIMKLB-2
Ensembl Gene ID: ENSG00000255829
Ensembl Transcript ID: ENST00000544922
Location (hg38): chr12:8664037-8669011
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000544922.1; RP11-20D14.3-002; OTTHUMT00000398868.1; NONHSAT026358
Alternative gene names: ENSG00000255829.1; RP11-20D14.3; OTTHUMG00000168218.1; AC092490.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.5143 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RIMKLB-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RIMKLB-2:2
4.0 lnc-RIMKLB-2:2
4.1 lnc-RIMKLB-2:2
5.0 lnc-RIMKLB-2:2
5.1 lnc-RIMKLB-2:2
5.2 lnc-RIMKLB-2:2