Transcript: lnc-RTL9-2:1

Basic information

LNCipedia transcript ID: lnc-RTL9-2:1 
LNCipedia gene ID: lnc-RTL9-2
Location (hg38): chrX:110175747-110177786
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2040 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT138165
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.4632 non-coding 
CPAT coding probability 30.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTL9-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RGAG1-2:1
4.0 lnc-RGAG1-2:1
4.1 lnc-RGAG1-2:1
5.0 lnc-RGAG1-2:1
5.1 lnc-TEX13C-193:1
5.2 lnc-RTL9-2:1