Transcript: lnc-ARHGAP20-6:2

Basic information

LNCipedia transcript ID: lnc-ARHGAP20-6:2 
LNCipedia gene ID: lnc-ARHGAP20-6
Location (hg38): chr11:109985243-109985660
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 418 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT024066
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -222.9468 non-coding 
CPAT coding probability 3.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP20-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RDX-6:1
4.0 lnc-RDX-6:1
4.1 lnc-RDX-6:1
5.0 lnc-RDX-6:1
5.1 lnc-ARHGAP20-14:1
5.2 lnc-ARHGAP20-6:2