Transcript: lnc-CAB39L-8:4

Basic information

LNCipedia transcript ID: lnc-CAB39L-8:4 
LNCipedia gene ID: lnc-CAB39L-8
Location (hg38): chr13:48912258-48913317
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1060 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_ge08_RFP2_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.795 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAB39L-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RCBTB2-7:1
4.0 lnc-RCBTB2-7:1
4.1 lnc-CAB39L-8:4
5.0 lnc-CAB39L-8:4
5.1 lnc-CCDC169-146:4
5.2 lnc-CAB39L-8:4