Transcript: lnc-RAD23B-8:1

Basic information

LNCipedia transcript ID: lnc-RAD23B-8:1 
LNCipedia gene ID: lnc-RAD23B-8
Location (hg38): chr9:107619525-107620361
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 515 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016125; NONHSAT133890
Alternative gene names: XLOC_007510; linc-ACTL7A-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.3008 non-coding 
CPAT coding probability 5.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD23B-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAD23B-8:1
3.1 lnc-RAD23B-8:1
4.0 lnc-RAD23B-8:1
4.1 lnc-RAD23B-8:1
5.0 lnc-RAD23B-8:1
5.1 lnc-PRPF4-107:6
5.2 lnc-RAD23B-8:1