Transcript: lnc-RAD1-5:4

Basic information

LNCipedia transcript ID: lnc-RAD1-5:4 
LNCipedia gene ID: lnc-RAD1-5
Location (hg38): chr5:34837712-34839308
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1432 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1117:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -116.981 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAD1-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RAD1-5:4
4.1 lnc-RAD1-5:4
5.0 lnc-RAD1-5:4
5.1 lnc-SELENOP-94:1
5.2 lnc-RAD1-5:4