Transcript: lnc-PZP-3:1

Basic information

LNCipedia transcript ID: lnc-PZP-3:1 
LNCipedia gene ID: lnc-PZP-3
Location (hg38): chr12:9323036-9324592
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1011 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00021285
Alternative gene names: XLOC_010008; linc-PZP-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.6027 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PZP-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PZP-3:1
3.1 lnc-PZP-3:1
4.0 lnc-PZP-3:1
4.1 lnc-PZP-3:1
5.0 lnc-PZP-3:1
5.1 lnc-M6PR-16:2
5.2 lnc-PZP-3:1