Transcript: lnc-FAM25C-7:1

Basic information

LNCipedia transcript ID: lnc-FAM25C-7:1 
LNCipedia gene ID: lnc-FAM25C-7
Location (hg38): chr10:48179867-48181684
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1818 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001jgx_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.4918 non-coding 
CPAT coding probability 10.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM25C-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPN20C-6:1
4.0 lnc-PTPN20C-6:1
4.1 lnc-PTPN20C-6:1
5.0 lnc-PTPN20C-6:1
5.1 lnc-LRRC18-23:1
5.2 lnc-FAM25C-7:1