Transcript: lnc-PTGDR-1:1

Basic information

LNCipedia transcript ID: lnc-PTGDR-1:1 
LNCipedia gene ID: lnc-PTGDR-1
Location (hg38): chr14:52257609-52259687
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 364 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_985_chr14:52724326-52726405_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.4342 non-coding 
CPAT coding probability 15.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTGDR-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTGDR-1:1
4.0 lnc-PTGDR-1:1
4.1 lnc-PTGDR-1:1
5.0 lnc-PTGDR-1:1
5.1 lnc-AP5M1-71:1
5.2 lnc-PTGDR-1:1