Transcript: LINC02201:10

Basic information

LNCipedia transcript ID: LINC02201:10 
LNCipedia gene ID: LINC02201
RefSeq ID: NR_109881
Location (hg38): chr5:122628952-122730560
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1652 bp
Exons: 12
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109881; NR_109881.1
Alternative gene names: LOC101927379


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.6818 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02201:10 no no no no

Available literature

  1. Tian (2017), Differentially Expressed lncRNAs in Gastric Cancer Patients: A Potential Biomarker for Gastric Cancer Prognosis., J Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIC-3:4
4.0 lnc-PPIC-3:4
4.1 lnc-PPIC-3:4
5.0 lnc-PPIC-3:4
5.1 LINC02201:3
5.2 LINC02201:10