Transcript: lnc-PLA2G2C-4:2

Basic information

LNCipedia transcript ID: lnc-PLA2G2C-4:2 
LNCipedia gene ID: lnc-PLA2G2C-4
Location (hg38): chr1:20233692-20301369
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2467 bp
Exons: 12
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001bdf_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.9797 non-coding 
CPAT coding probability 15.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLA2G2C-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLA2G2C-4:2
4.0 lnc-PLA2G2C-4:2
4.1 lnc-PLA2G2C-4:2
5.0 lnc-PLA2G2C-4:2
5.1 lnc-CAMK2N1-6:3
5.2 lnc-PLA2G2C-4:2