Transcript: lnc-PIGB-2:1

Basic information

LNCipedia transcript ID: lnc-PIGB-2:1 
LNCipedia gene ID: lnc-PIGB-2
Location (hg38): chr15:55164438-55194568
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 909 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002aeh_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.6929 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIGB-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIGB-2:1
4.0 lnc-PIGB-2:1
4.1 lnc-PIGB-2:1
5.0 lnc-PIGB-2:1
5.1 lnc-MAP2K1-148:1
5.2 lnc-PIGB-2:1