Transcript: lnc-P2RY1-1:1

Basic information

LNCipedia transcript ID: lnc-P2RY1-1:1 
LNCipedia gene ID: lnc-P2RY1-1
Location (hg38): chr3:152839390-152841439
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2050 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000460407; ENST00000460407.1; RP11-38P22.2-001; OTTHUMT00000356944.1; NONHSAT092772
Alternative gene names: ENSG00000241732; RP11-38P22.2; ENSG00000241732.1; OTTHUMG00000159695.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.3265 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-P2RY1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-P2RY1-1:1
3.1 lnc-P2RY1-1:1
4.0 lnc-P2RY1-1:1
4.1 lnc-P2RY1-1:1
5.0 lnc-P2RY1-1:1
5.1 lnc-SELENOT-37:1
5.2 lnc-P2RY1-1:1