Transcript: lnc-NEK5-3:1

Basic information

LNCipedia transcript ID: lnc-NEK5-3:1 
LNCipedia gene ID: lnc-NEK5-3
Location (hg38): chr13:52151127-52153978
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 339 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT033963
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 325.2402 coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NEK5-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEK5-1:2
4.0 lnc-NEK5-3:1
4.1 lnc-NEK5-3:1
5.0 lnc-NEK5-3:1
5.1 lnc-CCDC169-187:1
5.2 lnc-NEK5-3:1