Transcript: lnc-NDUFA5-1:1

Basic information

LNCipedia transcript ID: lnc-NDUFA5-1:1 
LNCipedia gene ID: lnc-NDUFA5-1
Ensembl Gene ID: ENSG00000230442
Ensembl Transcript ID: ENST00000440504
RefSeq ID: NR_111922
Location (hg38): chr7:123614161-123624957
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 555 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000440504.1; RP11-390E23.3-001; OTTHUMT00000347500.1; NONHSAT123052; NR_111922; ENST00000440504.5; NR_111922.1
Alternative gene names: ENSG00000230442.1; RP11-390E23.3; OTTHUMG00000157115.1; ENSG00000230442.5; AC006333.1; LOC102724555


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.811 non-coding 
CPAT coding probability 14.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NDUFA5-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDUFA5-1:1
4.0 lnc-NDUFA5-1:1
4.1 lnc-NDUFA5-1:1
5.0 lnc-NDUFA5-1:1
5.1 lnc-RNF133-7:1
5.2 lnc-NDUFA5-1:1