Transcript: lnc-NANOG-3:1

Basic information

LNCipedia transcript ID: lnc-NANOG-3:1 
LNCipedia gene ID: lnc-NANOG-3
Location (hg38): chr12:7899474-7900078
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 605 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT026274
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.1242 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NANOG-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NANOGP1-1:1
4.0 lnc-NANOGP1-1:1
4.1 lnc-NANOGP1-1:1
5.0 lnc-NANOGP1-1:1
5.1 lnc-CLEC4D-13:1
5.2 lnc-NANOG-3:1