Transcript: lnc-CCDC71L-1:12

Basic information

LNCipedia transcript ID: lnc-CCDC71L-1:12 
LNCipedia gene ID: lnc-CCDC71L-1
Location (hg38): chr7:106656768-106658957
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2183 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT122658
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.2034 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC71L-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAMPT-2:1
4.0 lnc-NAMPT-2:1
4.1 lnc-CCDC71L-1:12
5.0 lnc-CCDC71L-1:12
5.1 lnc-NRCAM-25:10
5.2 lnc-CCDC71L-1:12