Transcript: lnc-MUC19-1:19

Basic information

LNCipedia transcript ID: lnc-MUC19-1:19 
LNCipedia gene ID: lnc-MUC19-1
Location (hg38): chr12:40569625-40570832
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 550 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000546043.2
Alternative gene names: ENSG00000205592.13; MUC19


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 733.3459 coding 
CPAT coding probability 11.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MUC19-1:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MUC19-1:19
4.1 lnc-MUC19-1:19
5.0 lnc-MUC19-1:19
5.1 lnc-IRAK4-36:9
5.2 lnc-MUC19-1:19