Transcript: LINC02011:3

Basic information

LNCipedia transcript ID: LINC02011:3 
HGNC Gene Symbol: LINC02011    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2011
Ensembl Gene ID: ENSG00000260902
Ensembl Transcript ID: ENST00000566553
RefSeq ID: NR_135245
Location (hg38): chr3:14799331-14811414
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3830 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000566553.1; RP11-95M5.1-001; OTTHUMT00000430877.1; NONHSAT088362; NR_135245.1
Alternative gene names: ENSG00000260902.1; RP11-95M5.1; OTTHUMG00000175698.1; LINC02011; LOC152274


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.8267 non-coding 
CPAT coding probability 4.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02011:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPS25-2:1
4.0 lnc-MRPS25-2:1
4.1 lnc-MRPS25-2:1
5.0 lnc-MRPS25-2:1
5.1 LINC02011:2
5.2 LINC02011:3