Transcript: lnc-RFX2-1:10

Basic information

LNCipedia transcript ID: lnc-RFX2-1:10 
LNCipedia gene ID: lnc-RFX2-1
Location (hg38): chr19:6189728-6199529
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2376 bp
Exons: 2
Sources: Biogazelle lncRNA chip; NONCODE v4
Alternative transcript names: ENST00000502114; NONHSAT060744
Alternative gene names: ENSG00000247165


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.6822 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RFX2-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MLLT1-1:1
3.1 lnc-MLLT1-1:1
4.0 lnc-MLLT1-1:1
4.1 lnc-MLLT1-1:1
5.0 lnc-MLLT1-1:1
5.1 lnc-TIMM44-56:3
5.2 lnc-RFX2-1:10