Transcript: lnc-LRRC3B-1:3

Basic information

LNCipedia transcript ID: lnc-LRRC3B-1:3 
LNCipedia gene ID: lnc-LRRC3B-1
Location (hg38): chr3:26711551-26715453
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1279 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT088748
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -218.518 non-coding 
CPAT coding probability 2.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC3B-1:3 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC3B-1:3
4.0 lnc-LRRC3B-1:3
4.1 lnc-LRRC3B-1:3
5.0 lnc-LRRC3B-1:3
5.1 lnc-CMC1-14:2
5.2 lnc-LRRC3B-1:3