Transcript: lnc-KMT2E-1:10

Basic information

LNCipedia transcript ID: lnc-KMT2E-1:10 
LNCipedia gene ID: lnc-KMT2E-1
Ensembl Gene ID: ENSG00000237513
Ensembl Transcript ID: ENST00000415513
Location (hg38): chr7:104941063-104962060
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 685 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00013054; ENST00000415513; ENST00000415513.1; RP11-325F22.2-002; OTTHUMT00000348301.1; NONHSAT122583
Alternative gene names: XLOC_006195; linc-MLL5; ENSG00000237513; RP11-325F22.2; ENSG00000237513.1; OTTHUMG00000157277.1; AC007384.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.0957 non-coding 
CPAT coding probability 6.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KMT2E-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LHFPL3-1:1
3.1 lnc-LHFPL3-1:1
4.0 lnc-LHFPL3-1:1
4.1 lnc-MLL5-1:5
5.0 lnc-MLL5-1:5
5.1 lnc-KMT2E-1:4
5.2 lnc-KMT2E-1:10