Transcript: GASAL1:17

Basic information

LNCipedia transcript ID: GASAL1:17 
HGNC Gene Symbol: GASAL1    
HGNC Full Gene Name: growth arrest associated lncRNA 1
Ensembl Gene ID: ENSG00000253669
Ensembl Transcript ID: ENST00000522715
Location (hg38): chr8:102805517-102809566
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 692 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000522715; ENST00000522715.1; KB-1732A1.1-002; OTTHUMT00000380078.1; NONHSAT128111
Alternative gene names: ENSG00000253669; KB-1732A1.1; ENSG00000253669.2; OTTHUMG00000164736.2; ENSG00000253669.3; AP003356.1; GASAL1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.8091 non-coding 
CPAT coding probability 2.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GASAL1:17 no no no no

Available literature

  1. Gasri-Plotnitsky (2017), A novel lncRNA, GASL1, inhibits cell proliferation and restricts E2F1 activity., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KB-1507C5.2.1-3:1
3.1 lnc-KB-1507C5.2.1-3:1
4.0 lnc-KB-1507C5.2.1-3:1
4.1 lnc-KB-1507C5.2.1-3:1
5.0 lnc-KB-1507C5.2.1-3:1
5.1 GASAL1:2
5.2 GASAL1:17