Transcript: lnc-INSIG1-3:2

Basic information

LNCipedia transcript ID: lnc-INSIG1-3:2 
LNCipedia gene ID: lnc-INSIG1-3
Ensembl Gene ID: ENSG00000228521
Ensembl Transcript ID: ENST00000454149
Location (hg38): chr7:155204147-155205189
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 367 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00013100; ENST00000454149; ENST00000454149.2; AC099552.3-001; OTTHUMT00000322232.1; NONHSAT124346
Alternative gene names: XLOC_006302; linc-INSIG1-3; ENSG00000228521; AC099552.3; ENSG00000228521.2; OTTHUMG00000151323.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.7043 non-coding 
CPAT coding probability 4.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INSIG1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-INSIG1-3:2
3.1 lnc-INSIG1-3:2
4.0 lnc-INSIG1-3:2
4.1 lnc-INSIG1-3:2
5.0 lnc-INSIG1-3:2
5.1 lnc-INSIG1-3:2
5.2 lnc-INSIG1-3:2