Transcript: lnc-IL17RA-11:2

Basic information

LNCipedia transcript ID: lnc-IL17RA-11:2 
LNCipedia gene ID: lnc-IL17RA-11
Ensembl Gene ID: ENSG00000273203
Ensembl Transcript ID: ENST00000608373
Location (hg38): chr22:17067821-17070675
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2855 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608373.1
Alternative gene names: ENSG00000273203.1; AC006946.16; AC006946.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.6128 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17RA-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RA-11:2
4.0 lnc-IL17RA-11:2
4.1 lnc-IL17RA-11:2
5.0 lnc-IL17RA-11:2
5.1 lnc-SERPIND1-82:2
5.2 lnc-IL17RA-11:2