Transcript: lnc-C10orf82-3:1

Basic information

LNCipedia transcript ID: lnc-C10orf82-3:1 
LNCipedia gene ID: lnc-C10orf82-3
Location (hg38): chr10:116759790-116763764
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 786 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_381_chr10:118519300-118523275_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.9015 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C10orf82-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSPA12A-1:1
4.0 lnc-HSPA12A-1:1
4.1 lnc-HSPA12A-1:1
5.0 lnc-HSPA12A-1:1
5.1 lnc-NSMCE4A-90:1
5.2 lnc-C10orf82-3:1